Programming Contest
Cell Speed Challenge 2008規定課題部門 １位
里城晴紀，小長谷明彦: 「オンチップ並列処理を利用した密行列LU分解の実装」
Cell Speed Challenge 2008自由課題部門 ２位
里城晴紀，小長谷明彦: 「PDS最適化サイクル：Cell BEプログラムの最適化戦略の提案」
Related Works:
Journal Papers:
里城晴紀, 吉瀬謙二, 小長谷明彦. マルチコアアーキテクチャのための密行列LU分解のプログラミング技術, 情報処理学会論文誌コンピューティングシステム, Vol. 3, No. 3, pp. 199-208, Sep. 2010.
Conference Papers
- Yoshiki Yamaguchi, Tsutomu Maruyama, Fumikazu Konishi, Akihiko Konagaya:
High speed tablation system using an FPGA designed for distribution tables of frequent DNA subsequences. FPL 2007: 145-150 - Shingo Masuno, Tsutomu Maruyama, Yoshiki Yamaguchi, Akihiko Konagaya:
An FPGA Implementation of Multiple Sequence Alignment Based on Carrillo-Lipman Method. FPL 2007: 489-492 - Shingo Masuno, Tsutomu Maruyama, Yoshiki Yamaguchi, Akihiko Konagaya:
Multidimensional Dynamic Programming for Homology Search on Distributed Systems. Euro-Par 2006: 1127-1137 - Shingo Masuno, Tsutomu Maruyama, Yoshiki Yamaguchi, Akihiko Konagaya:
Multidimensional Dynamic Programming for Homology Search. FPL 2005: 173-178 - Yoshiki Yamaguchi, Tsutomu Maruyama, Akihiko Konagaya:
Three-Dimensional Dynamic Programming for Homology Search. FPL 2004: 505-515 - Makoto Taiji, Tetsu Narumi, Yousuke Ohno, Akihiko Konagaya:
MDGRAPE-3: A Petaflops Special-Purpose Computer System for Molecular Dynamics Simulations. PARCO 2003: 669-676 - Makoto Taiji, Tetsu Narumi, Yousuke Ohno, Noriyuki Futatsugi, Atsushi Suenaga, Naoki Takada, Akihiko Konagaya: Protein Explorer: A Petaflops Special-Purpose Computer System for Molecular Dynamics Simulations. SC 2003: 15
- Yoshiki Yamaguchi, Yosuke Miyajima, Tsutomu Maruyama, Akihiko Konagaya:
High Speed Homology Search Using Run-Time Reconfiguration. FPL 2002: 281-291 - Yoshiki Yamaguchi, Tsutomu Maruyama, Akihiko Konagaya:
High Speed Homology Search with FPGAs. Pacific Symposium on Biocomputing 2002: 271-282